Cover of the book 'The Signal and the Noise' by Nate Silver. Published by The Penguin PressJust finished Nate Silver’s book The Signal and the Noise, only a few years after it was published.

I enjoyed most of the book, especially the philosophical discussion behind it: observations of the world inherently involve uncertainty, so predictions based on those observations must incorporate those uncertainties. But as more data pour in, we should be humble enough to revise our models and predictions.

As a whole, the book was easy to follow and didn’t get too technical, giving simple, worked examples of how to apply Bayes’s Theorem, for example, to evaluate the probability that a positive result on a mammogram actually means a woman has breast cancer.

For my money, the chapters on baseball and chess were the best. I learned that in the 1997 rematch between Garry Kasparov and Deep Blue, Deep Blue pushed a pawn on the 44th move, apparently baffling Kasparov. Silver suggests Kasparov “concluded that the counterintuitive play must be a sign of superior intelligence” and lost his nerve, resigning the next game even though it could have been played to a draw. Turns out the move may have been a last-ditch, random choice by Deep Blue.

The book falls a bit short in other chapters, though. Prof. Michael Mann, famous climate scientist at Penn State, had some pretty strong criticism for the climate change chapter. I found the concluding chapter a little platitudinous, without a lot of the interesting technical discussion in previous chapters.

Still, a really engaging read and, like me, hopefully readers come away with a strengthened commitment to scientific skepticism.

A computer model of an hexagonal lipid-DNA complex. From https://www.equipes.lps.u-psud.fr/TRESSET/research5.html.

A computer model of an hexagonal lipid-DNA complex. From https://www.equipes.lps.u-psud.fr/TRESSET/research5.html.

Special biophysics seminar today hosted by my fellow prof. Matt Ferguson and presented by his former postdoc advisor Ralph Nossal on subtle changes in the properties of lipids as a function of temperature.

Dr. Nossal reviewed research by himself, Dr. Norman Gershfeld, and others going back to the 40s showing how the physical properties of lipids, including surface pressure and diffusivity, depend sensitively on their temperatures. Diffusivity, for example, for many biogenic and synthetic lipid solutions peak at very specific temperatures.

What’s so special about those temperatures? Nossal pointed out that they correspond very nearly to the body temperatures of the organisms in which the lipids are found. So this subtle behavior could be the result of biological tuning of the lipids to optimize their chemical behavior in their host organisms.

Artist's conception of a hot Jupiter shedding mass.

Artist’s conception of a hot Jupiter shedding mass.

At journal club today, we discussed a recent paper by Valsecchi et al. (2015) that looks at mass loss from hot Jupiters. These planets are so close to their host stars that the stars can blast away and rip the planets’ atmospheres apart.

By employing the sophisticated star/planet evolution model MESA, Valsecchi and colleagues found that the planets can shed most of their atmospheres, leaving behind a small sub-Neptune planet in a short period orbit. However, gravitational interactions between the planet and escaping gas actually push the planet away from the star as the planet is shedding mass, potentially out to orbital periods of a few days.

The upshot of this is that, based on these calculations, the recently discovered population of small ultra-short period planets probably did NOT originate from atmospheric stripping of more massive planets. So it’s not totally clear how these little planets originated, although Kevin Schlaufman suggested one still viable possibility.

Today’s attendees included Jennifer Briggs, Emily Jensen, Charlie Matthews, Jacob Sabin, and Tyler Wade.

restless_rocks“Tucked away in California’s Death Valley National Park, the flat basin known as Racetrack Playa is littered with stones that seem to migrate across the landscape. But how do they do it? Brian Jackson describes how he and collaborators Ralph Lorenz and Richard Norris solved a long-standing mystery.” http://physicsworld.com/cws/article/indepth/2015/jul/02/the-restless-rocks-of-racetrack-playa

Thanks to Ralph and Dick for their help with this article. It was a lot of fun to write.

I gave a presentation at University of Maryland’s Astronomy Department today, Jun 26 on my dust devil work. Here it is. Abstract below.

Summoning Devils in the Desert
Brian Jackson (bjackson@boisestate.edu)
Dept. of Physics, Boise State University, Boise ID

Dust devils are small-scale (few to many tens of meters) low-pressure vortices rendered visible by dust lofted in moderate to high (> 10 m/s) winds. They persist for minutes to hours and can travel kilometers, usually carried by the ambient wind. On Earth, they occur primarily in arid locations and can reduce air quality and endanger small aircraft. On Mars, they occur ubiquitously and likely dominate the supply of atmospheric dust, influence climate, and even lengthen the operating lifetimes of solar-powered landers. Studied for decades, the underlying formation, dynamics, and statistics of dust devils remain poorly understood, but the same technology revolution that brought us stealth drones and iPhones is helping to change that. In this presentation, I’ll discuss on-going field surveys involving miniature, autonomous instrumentation deployed at sites known for dust devil activity. Using a combination of pressure loggers and photovoltaic cells, these surveys are helping to reveal the underlying natures and structure of dust devils in a totally novel way. We’ve found, for example, that not all devils are dusty, but the dustiest devils are also probably the biggest. The most vigorous dust devils occur most frequently during the middle of the day in the summer, when convection driven by insolation is the most active, but low-pressure vortices apparently occur year-round, throughout the day and night. As in astronomical surveys, statistical inference using these results requires assessing important biases, including selection and detection biases, largely unconsidered in previous surveys. Accurately assessing the role of dust devils requires a complete knowledge of their population statistics since the influence of the largest and most rare devils may drastically outweigh that of smaller, more common devils.

Phase-folded and phase-binned light curve for KELT- 3, from Zhang+ (2015).

Phase-folded and phase-binned light curve for KELT- 3, from Zhang+ (2015).

At research group meeting on Thursday, we discussed a recent paper by Zhang and colleagues that investigated the performance of Canon’s EOS 60D and whether it was suitable to use for precision photometry to look for exoplanet transits.

Although the authors found the camera exhibited a few peculiarities (that are apparently not described in any of Canon’s documentation), they showed that it could be used to observe exoplanet transits — a really great result.

It means that astronomers, amateur or professional, who want to do transit observations don’t need to spend $10,000 to buy a high-end CCD camera. Instead, they can spend just a few hundred to produce reasonable quality transit light curves.

One especially tantalizing result from the paper: Zhang and colleagues mention having seen exoplanet transit-like signals for four of the target stars they studied, only one of which is known to host a planet — KELT-3 b. That means they may not only have recovered known transiting with the Canon EOS 60D; they may also have found three new ones. Presumably, they’re in the process of trying to confirm whether the other three are new planets.

UPDATE: The authors kindly updated me to say that follow-up observations indicated these three candidates are all false positives. But they would have discovered KELT-3 b with their survey, if it hadn’t already been discovered. So a pretty amazing achievement.

Attendees included Jennifer Briggs, Andrew Farrar, Nathan Grigsby, Emily Jensen, and Tyler Wade.

Had two nice big crashes today with my Blade 180QX. Fortunately, I caught them both on video. Unfortunately, the second broke two propeller arms, so I’m out of commission till replacements come in.

Broken propeller arms

Broken propeller arms

Here’s video of the first crash.

And here’s the second, more spectacular one.

 

 

In prep for an upcoming project (and because it’s ridiculously fun), I bought a Blade 180QX multicopter. It’s very easy to fly for someone like me who has no experience, and it comes with a nice camera (although not with the required micro SD card).

I shot this video this evening from Boise’s North End, taking off from North Junior High. I got a nice shot of the foothills, downtown, and the capital building. Be warned: the propellers are really loud.

In anticipation of the upcoming New Horizons fly-by of the Pluto system, a really exciting result from Mark Showalter of SETI and Doug Hamilton of UMD — complex gravitational interactions among the moons of Pluto, Charon, Styx, Nix, Kerberos, and Hydra, have driven Nix mad and make it rotate chaotically. A simulation of its rotational evolution is shown in the youtube video above.

Showalter and Hamilton analyzed Hubble images of the Pluto system to understand how the moons’ orbits evolve as the result of the gravitational tugs between the moons. The three moons Styx, Nix, and Hydra are very near to and probably in a three-body resonance reminiscent of the Galilean satellites. Computer models of that interaction allowed them to constrain the masses of the moons, somewhere in the range of Mars’ moon Deimos‘ mass.

We would expect that the complex gravitational environment as applied to such elongated moons would likely lead to complex rotation, and indeed, Showalter and Hamilton find that the phase curve for Nix, observed from 2010 to 2012, varies erratically, consistent with a chaotic rotation. Their analysis also shows that Hydra rotates chaotically; probably some of the other moons (except for Charon) as well.

One bit of good news for the New Horizons flyby emerges from all this: the systems’ chaotic dynamics probably keep it clear of rings or additional small moons that would pose hazards for New Horizons. It seems nature has decided the system is complicated enough already.

Attendees at today’s journal club included Jennifer Briggs, Emily Jensen, and Tyler Wade.